Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs12357387 | chr10:91080854 | C/T | 5.33E-8 | 207 | 16.48 | 16.93 | 6.92 | KM Plot |
KIRP | rs12408284 | chr1:95274792 | G/C | 3.04E-6 | 208 | 16.43 | 16.93 | 12.3 | KM Plot |
KIRP | rs1241657 | chr11:116839761 | T/C | 0.000543 | 207 | 11.43 | 16.47 | 16.53 | KM Plot |
KIRP | rs12417663 | chr11:22344818 | A/G | 5.81E-6 | 208 | 13.8 | 23.23 | 2.52 | KM Plot |
KIRP | rs1242062 | chr3:143375977 | A/G | 0.000431 | 214 | 11.43 | 13.92 | 16.43 | KM Plot |
KIRP | rs12423725 | chr12:8392363 | C/G | 0.00032 | 205 | 15.33 | 19.87 | 6.07 | KM Plot |
KIRP | rs12444979 | chr16:19933600 | C/T | 0.000611 | 208 | 16.47 | 15.2 | 11.43 | KM Plot |
KIRP | rs12445679 | chr16:19838883 | C/G | 0.000147 | 209 | 15.33 | 16.93 | 13.03 | KM Plot |
KIRP | rs12446176 | chr16:19851673 | G/A | 2.78E-5 | 213 | 14.83 | 18.12 | 15.58 | KM Plot |
KIRP | rs12446554 | chr16:19935073 | G/T | 0.000611 | 208 | 16.47 | 15.2 | 11.43 | KM Plot |
KIRP | rs12446632 | chr16:19935389 | G/A | 0.000611 | 208 | 16.47 | 15.2 | 11.43 | KM Plot |
KIRP | rs12446765 | chr16:4569625 | A/G | 3.63E-6 | 212 | 16.53 | 12.37 | 10.83 | KM Plot |
KIRP | rs12448812 | chr16:19839295 | T/C | 7.82E-5 | 211 | 14.85 | 18.47 | 15.52 | KM Plot |
KIRP | rs12450515 | chr17:9632247 | C/T | 0.000343 | 214 | 3.6 | 12.77 | 16.53 | KM Plot |
KIRP | rs12473739 | chr2:86425704 | C/T | 2.78E-6 | 211 | 11.43 | 13.63 | 16.73 | KM Plot |